Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848762.1_cds_XP_016510531.1_23360
CDS Infomation

[gene=LOC107827833] [db_xref=GeneID:107827833] [protein=zinc finger BED domain-containing protein RICESLEEPER 1-like] [protein_id=XP_016510531.1] [location=complement(join(217611..217646,219754..221417,222004..222064))] [gbkey=CDS]
Sequence

ATGAAACGGGGAATGACCAACGGAAAGCGGAAAACACTCTGTGACTTCTTTCCTGGATCT
GATGAACCAAGGAAGGGGAAAGGTCATGAGTGTGGACCAAGAAATGCAAATCTCAGGGAA
GAGGGCAGTAGTAACGTTGGGAAAGAGCATGTTTTCAAGGAAGAAACAGCTTATCGAGCT
ATGGCAAGGTTTTTCTGTCAATCTGGTATATCTCCAAAGTCAATAGAAAACGTGTACTTC
AAAAACTTAATTGCTTATCTTAATCCACAAACTCGTTTTTCATCTGCCATTCTCTCACGG
TATTGCTTGAAATTGTATGAGGAAGAGAAAGCGAGAGTTAAAGAAAATTTGAGAAGCTTG
AATGGACGGGTTAGCCTCTCAGTTGAGAGGTTAACGTATAACAAGTTCCATGACTTTGGC
TACTGGCGTTCCTCGGATTTTGAGGAAAATTGTTTTGATTTCATTTGTTTAAGAGTCCAT
TTCATTGATAAAGACTGGAAGCTACGGAGTTGGGTTATTAACGTTAGATCTTTTGGTGCG
TATGACGATTACATTGGCGAGACAATTAAGTGTCTTTCAGATTTTGGTATTGGAGATAAA
GTATCTGCTGTCACTGTGCATAGCTATCTGGACTTTGATGAGATTATTGAGGTCATTAAA
AGTAAACTTCTTGAAAAGAAAAGGCTCCAATTAGATGGACAATTGTTTCGCGTGTCTTGT
TGTGCAGACATTTTTAGTTCAATGGTGAAAAAAGCATTTGGGATGATAGAGGATTTAATC
AGTGACATTCGACTCATAGTATTTTGGGGCAAATCACTACCAGTTTGGAATGTGACATTT
CATAAATTAAAGGAAGCTTTGGAGTTAGAGGCTAAAGGAGAATACTTGAAAGATGATTAT
AAGGATTATGATATACCTTCGCCCCAAGAGTGGGAGAAAGTTAGGGGAGTATGTAAACTT
GTAGGACATGTCTATACTGCAGCAGAAGTGCTATTTATGTCAAAACGTCCCACTGCAGGT
CTCTACTTCCACAATCTCAATAAGCTTCGATTTAATCTGATGAAAGAGTTTGTGAGTTCA
GATGAATTTGTCAGAAATTTAGCCAACATTATGCTGAAAAAGTTTGACGAGTATTGGAAG
AATATATATTTGGTGTTGGCTCTAGCTACTATTATGGATCCACGCTACAAAGTGAAGTAC
TTAGATTTCTGTTTCTTGAAGTATGAAAATAACGATCATTTACCGCTCACATCTATCTTG
GAGGCAATCCGAAGCCTTCTCTATGACTATGTGGTGCACAGGTCCACAATGGAGTATCCT
ATGAGCGATGACGATTCTGACACGGGTGAAGATCTCCTTGAACCAACGGAAATTGTTAAT
GATCCTAGTTTTGGATTTGACTGTTCAGAAGAGTTTAGCAAATTCATCGAAACAACTAGT
CAGCCACCAAAGTCAGAAATTGACTGCTATCTAGAAGAACCTATTGTGCCTTGGACTAAG
AACTTTGATGAGTTGAGTTGGTGGAAAGCTGCAAGCCCTAAATATCCTGCCCTATCAAAT
TTAGCTCGTGATCTTTTGTCAATTCAATTGTCTCTTGTTACAGGCTATGATGCTTATTTT
ACAGATGTGCGTGAACCTGATAGCCACGTGACTTCCCTGGAGTCAGATTTAGTGAATGCC
TTGATGTCTACCAAAAGCTGGTTTGATAAACAGCGTCGTAATGCGATGGAAGCTGAGGGC
TCAGCAGTGCAGAATAATTGA

Peptide Sequence

PEP ID

XP_016510531.1
PEP Infomation

PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Nicotiana tabacum]
Sequence

MKRGMTNGKRKTLCDFFPGSDEPRKGKGHECGPRNANLREEGSSNVGKEHVFKEETAYRA
MARFFCQSGISPKSIENVYFKNLIAYLNPQTRFSSAILSRYCLKLYEEEKARVKENLRSL
NGRVSLSVERLTYNKFHDFGYWRSSDFEENCFDFICLRVHFIDKDWKLRSWVINVRSFGA
YDDYIGETIKCLSDFGIGDKVSAVTVHSYLDFDEIIEVIKSKLLEKKRLQLDGQLFRVSC
CADIFSSMVKKAFGMIEDLISDIRLIVFWGKSLPVWNVTFHKLKEALELEAKGEYLKDDY
KDYDIPSPQEWEKVRGVCKLVGHVYTAAEVLFMSKRPTAGLYFHNLNKLRFNLMKEFVSS
DEFVRNLANIMLKKFDEYWKNIYLVLALATIMDPRYKVKYLDFCFLKYENNDHLPLTSIL
EAIRSLLYDYVVHRSTMEYPMSDDDSDTGEDLLEPTEIVNDPSFGFDCSEEFSKFIETTS
QPPKSEIDCYLEEPIVPWTKNFDELSWWKAASPKYPALSNLARDLLSIQLSLVTGYDAYF
TDVREPDSHVTSLESDLVNALMSTKSWFDKQRRNAMEAEGSAVQNN

Transcript Sequence

Gene sequence data has not been registered.